Nonlinear charge transport mechanism in periodic and disordered DNA
نویسنده
چکیده
We study a model for polaron-like charge transport mechanism along DNAmolecules with emphasis on the impact of parametrical and structural disorder. Our model Hamiltonian takes into account the coupling of the charge carrier to two different kind of modes representing fluctuating twist motions of the base pairs and H-bond distortions within the double helix structure of λ−DNA. Localized stationary states are constructed with the help of a nonlinear map approach for a periodic double helix and in the presence of intrinsic static parametrical and/or structural disorder reflecting the impact of ambient solvent coordinates. It is demonstrated that charge transport is mediated by moving polarons respectively breather compounds carrying not only the charge but causing also local temporal deformations of the helix structure through the traveling torsion and bond breather components illustrating the interplay of structure and function in biomolecules.
منابع مشابه
Field Dependent Charge Carrier Transport for Organic Semiconductors at the Time of Flight Configuration
In this paper, we used the time-of-flight (TOF) of a charge packet, that injected by a voltage pulse to calculate the drift velocity and mobility of holes in organic semiconducting polymers. The technique consists in applying a voltage to the anode and calculating the time delay in the appearance of the injected carriers at the other contact. The method is a simple way to determine the charge t...
متن کاملNonlinear Electromagnetic Dynamics Underlying Meridians in Living Systems
The nonlinear mechanism of charge transport is discussed which is based on the concept of Davydov's solitons in macromolecules, such as DNA and polypeptides [1]. Such solitons are nonlinear states of electrons or AMID-1 excitations of peptide groups, bound with the local distortion of macromolecules, which can propagate without energy dissipation on macroscopic distances and provide energy and ...
متن کاملElectronic Transmission Wave Function of Disordered Graphene by Direct Method and Green's Function Method
We describe how to obtain electronic transport properties of disordered graphene, including the tight binding model and nearest neighbor hopping. We present a new method for computing, electronic transport wave function and Greens function of the disordered Graphene. In this method, based on the small rectangular approximation, break up the potential barriers in to small parts. Then using the f...
متن کاملOn periodic boundary condition in Monte Carlo simulation of charge transport in disordered organic systems
In this article we present an artifact due to the conventional use of periodic boundary condition (PBC) which produces misleading results on charge transport behavior at low field regime. When simulated using PBC, artifact produces a negative field dependence of mobility (NFDM) at low field regime even when the positional disorder is neglected. The artifact is due to the extra bias the carrier ...
متن کاملSpin-Orbit Based Coherent Spin Ratchets
The concept of ratchets, driven asymmetric periodic structures giving rise to directed particle flow, has recently been generalized to a quantum ratchet mechanism for spin currents mediated through spin-orbit interaction. Here we consider such systems in the coherent mesoscopic regime and generalize the proposal of a minimal spin ratchet model based on a non-interacting clean quantum wire with ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره شماره
صفحات -
تاریخ انتشار 2003